rfmm_100567.1

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Basic information about the TSS


TSS ID:rfmm_100567.1
Species:mouse
Chr:chr10
Start:121422747
End:121422757
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2345084,EM10E0965898)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_019786.4:48
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000020316.4:55
  • ENSMUST00000219400.2:65
  • AK168193:65
  • AK004649:95
  • ENSMUST00000219493.2:101
  • AK083214:102
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-53
Nearest PromoterID:NM_019786.4
Entrez ID:Tbk1
Nearest Unigene:NM_019786
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):