rfmm_100607.1

Basic information about the TSS

TSS ID:	rfmm_100607.1
Species:	mouse
Chr:	chr10

Start:	122514886
End:	122514896
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2345485,EM10E0966038)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	BC028258:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	AK040194:28 AK051434:-176 AK220260:-176 ENSMUST00000067918.12:-199 AK134804:-199 ENSMUST00000161487.8:-203 AK040207:-203 AK077422:-203 AK029461:209 AK150309:209 ENSMUST00000162853.8:-219 NM_176919.4:-219 NM_001110218.1:-219 AK043121:-219 NR_106182.1:324 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	224
Nearest PromoterID:	NM_001110218.1
Entrez ID:	Ppm1h
Nearest Unigene:	NM_176919
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:	0.200000
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):