rfmm_100717.1

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Basic information about the TSS


TSS ID:rfmm_100717.1
Species:mouse
Chr:chr10
Start:126896128
End:126896175
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2346513,EM10E0966385)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198272:-58
MA433849:-58
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000040307.6:75
  • NM_001033262.2:75
  • AK158026:75
  • LF225028:112
  • MA460605:112
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-98
Nearest PromoterID:NM_001033262.2
Entrez ID:Marchf9
Nearest Unigene:NM_001033262
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.063830
GC%:0.791667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):