rfmm_100719.1

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Basic information about the TSS


TSS ID:rfmm_100719.1
Species:mouse
Chr:chr10
Start:126896208
End:126896256
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2346513,EM10E0966385)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198272:0
MA433849:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000040307.6:155
  • NM_001033262.2:155
  • AK158026:155
  • LF225028:192
  • MA460605:192
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-179
Nearest PromoterID:NM_001033262.2
Entrez ID:Marchf9
Nearest Unigene:NM_001033262
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.125000
GC%:0.755102
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):