rfmm_100833.1

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Basic information about the TSS


TSS ID:rfmm_100833.1
Species:mouse
Chr:chr10
Start:127124285
End:127124299
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2346723,EM10E0966520)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF198285:-17
MA433862:-17
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF225116:23
  • MA460693:23
  • BC059015:-341
  • ENSMUST00000156208.2:-423
  • NM_001379571.1:-451
  • NM_001379570.1:-451
  • ENSMUST00000026476.13:-460
  • AK158797:-465
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:232
Nearest PromoterID:XM_011243269.4
Entrez ID:Mbd6
Nearest Unigene:XM_011243267
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):