rfmm_100986.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_100986.1
Species:mouse
Chr:chr10
Start:127595624
End:127595635
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2347076,EM10E0966754)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_080436.3:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000128247.2:21
  • AK132181:21
  • ENSMUST00000073639.6:-34
  • AK136574:-34
  • AY028928:44
  • BC137930:80
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_080436.3
Entrez ID:Rdh1
Nearest Unigene:NM_080436
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):