rfmm_10142.1

Basic information about the TSS

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TSS ID: rfmm_10142.1 Species: mouse Chr: chr1		Start: 180524588 End: 180524593 Strand: -
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2304959,EM10E0949441)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000027778.8:-6 AF154573:-6 BC099877:-6 BC099876:-6 GeneID: 27217 HGNC/MGI_ID: MGI:1351322 UniProt_ID: Q9WUI0 Nearer transcript ids and distances: AB221547:10 AF135063:11 AF201959:46 view more...

Gene_name: Mix1 homeobox-like 1 (Xenopus laevis) Gene_symbol: Mixl1 Gene_synonyms: Mml Gene_source: MGI:1351322

TATA-Box annotation

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Distance to TSS:	9
Nearest PromoterID:	NM_013729.3
Entrez ID:	Mixl1
Nearest Unigene:	NM_013729
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Mix1 homeobox-like 1 (Xenopus laevis)
Gene Alias:
Gene Type:
CpG%:	0.200000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.