rfmm_102033.1

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Basic information about the TSS


TSS ID:rfmm_102033.1
Species:mouse
Chr:chr11
Start:6576121
End:6576191
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2349899,EM10E0968255)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK050754:0
AK089624:0
GeneID:320016
HGNC/MGI_ID:MGI:2443169
UniProt_ID:
Nearer transcript ids and distances:
  • LF226152:182
  • MA461729:182
view more...
Gene_name:RIKEN cDNA D030016M11 gene
Gene_symbol:D030016M11Rik
Gene_synonyms:
Gene_source:MGI:2443169



TATA-Box annotation


Distance to TSS:-67
Nearest PromoterID:XM_006514607.5
Entrez ID:Tbrg4
Nearest Unigene:XR_001779944
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA D030016M11 gene
Gene Alias:
Gene Type:
CpG%:0.085714
GC%:0.619718
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.