rfmm_102542.1

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Basic information about the TSS


TSS ID:rfmm_102542.1
TSS ID(Version3):mm_101217.1
Species:mouse
Chr:chr11
Start:20062876
End:20062937
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2352649,EM10E0969263)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000000137.8:0
ENSMUST00000134779.2:0
BC027799:0
GeneID:66713
HGNC/MGI_ID:MGI:1913963
UniProt_ID:Q5SW83
Nearer transcript ids and distances:
  • ENSMUST00000132022.2:9
  • AK032832:9
  • AK033014:9
  • NM_001362899.1:-14
  • NM_146243.2:-14
  • AK088216:14
  • AK163217:14
  • LF198393:-15
  • MA433970:-15
  • BC047530:26
view more...
Gene_name:ARP2 actin-related protein 2
Gene_symbol:Actr2
Gene_synonyms:4921510D23Rik Arp2 D6Ertd746e
Gene_source:MGI:1913963



TATA-Box annotation


Distance to TSS:45
Nearest PromoterID:NM_146243.2
Entrez ID:Actr2
Nearest Unigene:NM_001362899
Nearest Refseq:
Nearest Ensembl:
Gene Name:ARP2 actin-related protein 2
Gene Alias:
Gene Type:
CpG%:0.114754
GC%:0.790323
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.