rfmm_102562.1

Basic information about the TSS

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TSS ID: rfmm_102562.1 Species: mouse Chr: chr11		Start: 20199361 End: 20199433 Strand: -
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2352742,EM10E0969318)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000050611.14:0 ENSMUST00000109596.8:0 ENSMUST00000162811.2:0 ENSMUST00000161218.2:0 AK140820:0 AK031622:0 BC027174:0 AK146669:0 AK145286:0 AK169934:0 AK162594:0 AK172304:0 GeneID: 216543 HGNC/MGI_ID: MGI:2667663 UniProt_ID: Q3T9T3 Q3TRP8 Q3ULV4 Q8C0D9 Nearer transcript ids and distances: AK172975:6 AK205251:41 view more...

Gene_name: centrosomal protein 68 Gene_symbol: Cep68 Gene_synonyms: 6030463E10Rik Gene_source: MGI:2667663

TATA-Box annotation

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Distance to TSS:	27
Nearest PromoterID:	NM_172260.3
Entrez ID:	Cep68
Nearest Unigene:	NM_172260
Nearest Refseq:
Nearest Ensembl:
Gene Name:	centrosomal protein 68
Gene Alias:
Gene Type:
CpG%:	0.152778
GC%:	0.849315
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.