rfmm_104220.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | pELS,CTCF-bound (EM10D2360355,EM10E0972181) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -208 |
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| Nearest PromoterID: | NM_001362526.1 |
| Entrez ID: | Hnrnph1 |
| Nearest Unigene: | XM_036156877 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.171429 |
| GC%: | 0.722222 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "NM_001362528.1:-214 NM_001362525.1:-214 BC056224:-222 BC042187:-227 ENSMUST00000150153.8:-242 ENSMUST00000123371.8:-242 ENSMUST00000077817.8:-242 AK052983:-242 Y14196:-242 AK088169:-242 ENSMUST00000128220.8:245 ENSMUST00000129631.8:245 ENSMUST00000133435.2:245 NM_001362533.1:245 NM_001362530.1:245 ENSMUST00000127964.8:-246 BC027002:248 ENSMUST00000134230.8:255 ENSMUST00000126737.8:-260 BC016459:-260 ENSMUST00000069304.14:-292 NM_001362534.1:-333 NM_001362527.1:-333 NM_001347487.2:-333 NM_021510.3:-333 NM_001362522.1:-333 NM_001362532.1:-333 NM_001362524.1:-333 AK219260:355" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.