rfmm_104354.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_104354.1
Species:mouse
Chr:chr11
Start:51891759
End:51891775
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2361012,EM10E0972501)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000147412.2:-79
KY467585:-79
GeneID:213084
HGNC/MGI_ID:MGI:2388268 MGI:3650262
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:cyclin-dependent kinase-like 3; predicted gene 12204
    Gene_symbol:Cdkl3 Gm12204
    Gene_synonyms:B230379H01Rik
    Gene_source:MGI:2388268 MGI:3650262



    TATA-Box annotation


    Distance to TSS:73
    Nearest PromoterID:XM_006532773.4
    Entrez ID:Cdkl3
    Nearest Unigene:XM_030245762
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:cyclin-dependent kinase-like 3; predicted gene 12204
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.411765
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.