rfmm_106938.1

Basic information about the TSS

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TSS ID: rfmm_106938.1 Species: mouse Chr: chr11		Start: 70130621 End: 70130686 Strand: -
Source datasets	PRJDB10397|GSE117655|DRA000914
Protocol	C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS (EM10D2368547,EM10E0976004)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000176116.8:0 ENSMUST00000176268.2:0 ENSMUST00000040428.4:0 BC024417:0 AK018709:0 AK171975:0 AK009592:0 AK003548:0 GeneID: 52898 HGNC/MGI_ID: MGI:106369 MGI:5439457 UniProt_ID: H3BJV0 Q8K3C0 Nearer transcript ids and distances: ENSMUST00000125752.3:15 BC021602:15 BC021603:15 LF228583:307 MA464160:307 view more...

Gene_name: predicted gene 21988; ribonuclease, RNase K Gene_symbol: Gm21988 Rnasek Gene_synonyms: 2310033H11Rik D11Bwg0434e Gene_source: MGI:106369 MGI:5439457

TATA-Box annotation

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Distance to TSS:	25
Nearest PromoterID:	NM_173742.3
Entrez ID:	Rnasek
Nearest Unigene:	NM_173742
Nearest Refseq:
Nearest Ensembl:
Gene Name:	predicted gene 21988; ribonuclease, RNase K
Gene Alias:
Gene Type:
CpG%:	0.076923
GC%:	0.651515
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.