rfmm_107248.1

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Basic information about the TSS


TSS ID:rfmm_107248.1
TSS ID(Version3):mm_97038.1
Species:mouse
Chr:chr11
Start:72192381
End:72192513
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000151440.8:0
ENSMUST00000146233.8:0
ENSMUST00000140842.9:0
ENSMUST00000094041.4:0
ENSMUST00000142921.2:0
AK046736:0
AK140315:0
BC146440:0
BC153050:0
MN366017:0
MN366018:0
MN366019:0
GeneID:327959
HGNC/MGI_ID:MGI:3772572
UniProt_ID:A0A6G7MA53 A0A6G7MA55 A0A6G7MAJ9 F6ZMN8 Q5NBU8 Z4YN17
Nearer transcript ids and distances:
    Gene_name:XIAP associated factor 1
    Gene_symbol:Xaf1
    Gene_synonyms:
    Gene_source:MGI:3772572



    TATA-Box annotation


    Distance to TSS:-8
    Nearest PromoterID:NM_001037713.4
    Entrez ID:Xaf1
    Nearest Unigene:XM_011249084
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:XIAP associated factor 1
    Gene Alias:
    Gene Type:
    CpG%:0.015152
    GC%:0.496241
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.