rfmm_107443.1

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Basic information about the TSS


TSS ID:rfmm_107443.1
Species:mouse
Chr:chr11
Start:75063380
End:75063395
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1240265,EM10E0509636)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000134252.2:0
AK006051:0
GeneID:668604
HGNC/MGI_ID:MGI:1922792
UniProt_ID:
Nearer transcript ids and distances:
  • HM627212:-79
  • LF203890:-80
  • MA439467:-80
  • LF198675:-80
  • MA434252:-80
view more...
Gene_name:RIKEN cDNA 1700016P03 gene
Gene_symbol:1700016P03Rik
Gene_synonyms:
Gene_source:MGI:1922792



TATA-Box annotation


Distance to TSS:540
Nearest PromoterID:XR_004937197.1
Entrez ID:LOC118567915
Nearest Unigene:XR_004937197
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700016P03 gene
Gene Alias:
Gene Type:
CpG%:0.066667
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.