rfmm_107711.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_107711.1
TSS ID(Version3):mm_97295.1
Species:mouse
Chr:chr11
Start:76297992
End:76298166
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000152183.2:0
ENSMUST00000164102.2:0
BC055279:0
AK011745:0
AK028132:0
AK017389:0
AK012130:0
AK153837:0
AF223950:0
BC022610:0
GeneID:56322
HGNC/MGI_ID:MGI:1929742
UniProt_ID:E9PXB9 Z4YN86
Nearer transcript ids and distances:
  • ENSMUST00000021203.7:-23
  • NM_023355.2:-23
  • NM_019818.5:-23
  • Z49228:77
  • ENSMUST00000120699.8:-214
  • NM_001291161.1:-241
  • NR_111896.1:-241
view more...
Gene_name:translocase of inner mitochondrial membrane 22
Gene_symbol:Timm22
Gene_synonyms:2610511O07Rik
Gene_source:MGI:1929742



TATA-Box annotation


Distance to TSS:110
Nearest PromoterID:NM_019818.5
Entrez ID:Timm22
Nearest Unigene:NR_111896
Nearest Refseq:
Nearest Ensembl:
Gene Name:translocase of inner mitochondrial membrane 22
Gene Alias:
Gene Type:
CpG%:0.063218
GC%:0.622857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.