rfmm_1083.1

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Basic information about the TSS


TSS ID:rfmm_1083.1
Species:mouse
Chr:chr1
Start:37527710
End:37527731
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D1048680,EM10E0434809)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000192316.2:24
AK019839:24
GeneID:77633
HGNC/MGI_ID:MGI:1924883
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000151866.2:-332
Gene_name:RIKEN cDNA 4930594C11 gene
Gene_symbol:4930594C11Rik
Gene_synonyms:
Gene_source:MGI:1924883



TATA-Box annotation


Distance to TSS:-34
Nearest PromoterID:NR_024017.2
Entrez ID:4930594C11Rik
Nearest Unigene:NR_024017
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 4930594C11 gene
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.409091
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.