rfmm_110122.1

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Basic information about the TSS


TSS ID:rfmm_110122.1
TSS ID(Version3):mm_98567.1
mm_98568.1
mm_98566.1
Species:mouse
Chr:chr11
Start:95275703
End:95275783
Strand:+
Source datasetsFANTOM5|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2378516,EM10E0980957)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000131193.3:0
ENSMUST00000141284.2:0
AK007711:0
AK002961:0
D87990:0
BC002029:0
GeneID:110172
HGNC/MGI_ID:MGI:1343133 MGI:1921086
UniProt_ID:E0CXH1
Nearer transcript ids and distances:
  • NM_001357797.1:-21
  • NM_016752.3:-21
  • AK160124:-21
  • ENSMUST00000146556.2:-120
  • ENSMUST00000021243.16:-185
  • LF198801:-221
  • MA434378:-221
view more...
Gene_name:solute carrier family 35, member B1; solute carrier family 35, member B2
Gene_symbol:Slc35b1 Slc35b2
Gene_synonyms:1110003M08Rik PAPST1 Ugalt2
Gene_source:MGI:1343133 MGI:1921086



TATA-Box annotation


Distance to TSS:26
Nearest PromoterID:XM_030245471.1
Entrez ID:Slc35b1
Nearest Unigene:NM_001357797
Nearest Refseq:
Nearest Ensembl:
Gene Name:solute carrier family 35, member B1; solute carrier family 35, member B2
Gene Alias:
Gene Type:
CpG%:0.150000
GC%:0.740741
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.