rfmm_110588.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_110588.1
Species:mouse
Chr:chr11
Start:97391177
End:97391194
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000056955.2:11
AK016967:11
GeneID:100141474
HGNC/MGI_ID:MGI:1918475 MGI:3697726
UniProt_ID:Q9D3X4
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 4933428G20 gene; Rho GTPase activating protein 23
    Gene_symbol:4933428G20Rik Arhgap23
    Gene_synonyms:
    Gene_source:MGI:1918475 MGI:3697726



    TATA-Box annotation


    Distance to TSS:-18
    Nearest PromoterID:XM_030245433.2
    Entrez ID:4933428G20Rik
    Nearest Unigene:XM_030245433
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 4933428G20 gene; Rho GTPase activating protein 23
    Gene Alias:
    Gene Type:
    CpG%:0.235294
    GC%:0.777778
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.