rfmm_110720.1

Basic information about the TSS

TSS ID:	rfmm_110720.1
Species:	mouse
Chr:	chr11

Start:	97877211
End:	97877298
Strand:	-

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2380199,EM10E0982014)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000017561.15:0 ENSMUST00000107565.3:0 ENSMUST00000141708.2:0 ENSMUST00000107564.2:0 AK036144:0 AK153684:0 AK010361:0 AK040620:0
GeneID:	72324
HGNC/MGI_ID:	MGI:1919574
UniProt_ID:	A2A539 Q91ZV7
Nearer transcript ids and distances:	AF378760:5 BC114352:19 KU257675:129 view more...

Gene_name:	plexin domain containing 1
Gene_symbol:	Plxdc1
Gene_synonyms:	2410003I07Rik Tem7
Gene_source:	MGI:1919574

TATA-Box annotation

Distance to TSS:	18
Nearest PromoterID:	NM_001163608.1
Entrez ID:	Plxdc1
Nearest Unigene:	NM_028199
Nearest Refseq:
Nearest Ensembl:
Gene Name:	plexin domain containing 1
Gene Alias:
Gene Type:
CpG%:	0.149425
GC%:	0.795455
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.