rfmm_11114.1

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Basic information about the TSS


TSS ID:rfmm_11114.1
Species:mouse
Chr:chr2
Start:4923703
End:4923716
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2622855,EM10E1082120)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_010726.2:91
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK146753:106
  • ENSMUST00000027975.8:114
  • BC002018:114
  • AK168648:122
  • AF023463:126
  • D88670:130
  • AK164495:142
  • AK151372:142
  • AK165412:148
  • AK169213:150
  • ENSMUST00000146933.2:175
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-98
Nearest PromoterID:NM_010726.2
Entrez ID:Phyh
Nearest Unigene:NM_010726
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):