rfmm_1117.1

Basic information about the TSS

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TSS ID: rfmm_1117.1 TSS ID(Version3): mm_532.1 mm_169256.1 Species: mouse Chr: chr1		Start: 37929601 End: 37929647 Strand: +
Source datasets	DRA000914|PRJDB10397|GSE117655
Protocol	CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2268451,EM10E0934315)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000193673.6:0 ENSMUST00000161694.2:0 ENSMUST00000160082.3:0 AK009074:0 AK089015:0 AK085466:0 GeneID: 107734 HGNC/MGI_ID: MGI:1333820 UniProt_ID: Q9D7N6 Nearer transcript ids and distances: ENSMUST00000027256.12:-43 NM_001356482.1:-43 NM_027098.3:-43 LF192628:-44 MA428205:-44 LF214858:147 MA450435:147 LF214859:417 MA450436:417 LF214860:493 MA450437:493 view more...

Gene_name: mitochondrial ribosomal protein L30 Gene_symbol: Mrpl30 Gene_synonyms: 2310001L22Rik MRP-L28 Rpml28 Gene_source: MGI:1333820

TATA-Box annotation

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Distance to TSS:	-10
Nearest PromoterID:	XM_011238417.3
Entrez ID:	Mrpl30
Nearest Unigene:	NM_027098
Nearest Refseq:
Nearest Ensembl:
Gene Name:	mitochondrial ribosomal protein L30
Gene Alias:
Gene Type:
CpG%:	0.086957
GC%:	0.659574
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.