rfmm_112848.1

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Basic information about the TSS


TSS ID:rfmm_112848.1
Species:mouse
Chr:chr11
Start:109237702
End:109237712
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2386098,EM10E0985259)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK007092:0
GeneID:67927
HGNC/MGI_ID:MGI:1915177
UniProt_ID:
Nearer transcript ids and distances:
  • NR_027883.1:-9
  • AK006164:-9
  • ENSMUST00000190043.2:-37
view more...
Gene_name:RIKEN cDNA 1700096J18 gene
Gene_symbol:1700096J18Rik
Gene_synonyms:
Gene_source:MGI:1915177



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NR_027883.1
Entrez ID:1700096J18Rik
Nearest Unigene:NR_027883
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 1700096J18 gene
Gene Alias:
Gene Type:
CpG%:0.100000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.