rfmm_113824.1

Basic information about the TSS

TSS ID:	rfmm_113824.1
TSS ID(Version3):	mm_100284.1 mm_100285.1
Species:	mouse
Chr:	chr11

Start:	117700480
End:	117700529
Strand:	+

Source datasets

FANTOM5|DRA000914|PRJDB10397|GSE117655

Protocol

CAGE|CAGE_and_CAGEscan|C1CAGE|deepCAGE

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS,CTCF-bound (EM10D2390356,EM10E0987495)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000026649.14:0 ENSMUST00000132298.2:0 ENSMUST00000177131.8:0 ENSMUST00000177241.2:0 ENSMUST00000120928.2:0 AK150234:0 AK170681:0 AF151985:0 BC004829:0 AF364049:0 AK157343:0 AJ002307:0
GeneID:	20973
HGNC/MGI_ID:	MGI:1328324 MGI:5313155
UniProt_ID:	B0QZP8 H3BIZ8 H3BJY1 H3BKF4 O55101
Nearer transcript ids and distances:	ENSMUST00000175737.2:9 AK185198:37 view more...

Gene_name:	predicted gene 20708; synaptogyrin 2
Gene_symbol:	Gm20708 Syngr2
Gene_synonyms:	Clast2 cellugyrin
Gene_source:	MGI:1328324 MGI:5313155

TATA-Box annotation

Distance to TSS:	11
Nearest PromoterID:	NM_009304.2
Entrez ID:	Syngr2
Nearest Unigene:	NM_009304
Nearest Refseq:
Nearest Ensembl:
Gene Name:	predicted gene 20708; synaptogyrin 2
Gene Alias:
Gene Type:
CpG%:	0.142857
GC%:	0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.