rfmm_114297.1

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Basic information about the TSS


TSS ID:rfmm_114297.1
Species:mouse
Chr:chr11
Start:120239509
End:120239608
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK002420:0
AK005967:0
GeneID:66838
HGNC/MGI_ID:MGI:1914088
UniProt_ID:Q9CVY3 Q9CWA9
Nearer transcript ids and distances:
  • ENSMUST00000143813.2:-5
  • NR_038126.1:-5
  • LF199022:-6
  • MA434599:-6
  • LF231625:299
  • MA467202:299
  • LF231626:442
  • MA467203:442
view more...
Gene_name:RIKEN cDNA 0610009L18 gene
Gene_symbol:0610009L18Rik
Gene_synonyms:
Gene_source:MGI:1914088



TATA-Box annotation


Distance to TSS:54
Nearest PromoterID:NR_038126.1
Entrez ID:0610009L18Rik
Nearest Unigene:NR_038126
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 0610009L18 gene
Gene Alias:
Gene Type:
CpG%:0.191919
GC%:0.820000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.