rfmm_114307.1

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Basic information about the TSS


TSS ID:rfmm_114307.1
TSS ID(Version3):mm_106501.1
Species:mouse
Chr:chr11
Start:120269463
End:120269605
Strand:-
Source datasetsFANTOM5|EPD|PRJDB10397|GSE117655|DRA000914
ProtocolCAGE|TSS_database|C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2392115,EM10E0988577)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000135635.8:0
ENSMUST00000026448.10:0
ENSMUST00000154826.2:0
ENSMUST00000148520.2:0
ENSMUST00000152346.2:0
AK147900:0
AK148234:0
AK082976:0
AK165631:0
AK009114:0
GeneID:71885
HGNC/MGI_ID:MGI:1919135
UniProt_ID:A2ACJ2 Q9D7M0
Nearer transcript ids and distances:
  • BC034203:20
  • ENSMUST00000153015.2:163
view more...
Gene_name:Fanconi anemia core complex associated protein 100
Gene_symbol:Faap100
Gene_synonyms:2310003H01Rik
Gene_source:MGI:1919135



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_027980.2
Entrez ID:Faap100
Nearest Unigene:NM_027980
Nearest Refseq:
Nearest Ensembl:
Gene Name:Fanconi anemia core complex associated protein 100
Gene Alias:
Gene Type:
CpG%:0.147887
GC%:0.769231
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.