rfmm_114593.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_114593.1
Species:mouse
Chr:chr11
Start:121279013
End:121279093
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000106107.3:0
ENSMUST00000124639.2:0
ENSMUST00000135290.2:0
BC096601:0
GeneID:217371
HGNC/MGI_ID:MGI:2183451
UniProt_ID:B1ATT4
Nearer transcript ids and distances:
  • AF425643:48
  • AB232638:48
  • ENSMUST00000149948.8:122
view more...
Gene_name:Rab40B, member RAS oncogene family
Gene_symbol:Rab40b
Gene_synonyms:rar
Gene_source:MGI:2183451



TATA-Box annotation


Distance to TSS:24
Nearest PromoterID:NM_139147.3
Entrez ID:Rab40b
Nearest Unigene:XM_036156620
Nearest Refseq:
Nearest Ensembl:
Gene Name:Rab40B, member RAS oncogene family
Gene Alias:
Gene Type:
CpG%:0.137500
GC%:0.777778
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.