rfmm_115566.1

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Basic information about the TSS


TSS ID:rfmm_115566.1
Species:mouse
Chr:chr12
Start:23850939
End:23850949
Strand:-
Source datasetsDRA000914
ProtocolCAGE_and_CAGEscan
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:DNase-H3K4me3 (EM10D1285217,EM10E0532536)
Category:DNase-H3K4me3

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000221991.2:292
GeneID:
HGNC/MGI_ID:MGI:6096389
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 47437
    Gene_symbol:Gm47437
    Gene_synonyms:
    Gene_source:MGI:6096389



    TATA-Box annotation


    Distance to TSS:13
    Nearest PromoterID:XM_036157755.1
    Entrez ID:Gm38699
    Nearest Unigene:XR_004937748
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 47437
    Gene Alias:
    Gene Type:
    CpG%:0.200000
    GC%:0.727273
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.