rfmm_116470.1

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Basic information about the TSS


TSS ID:rfmm_116470.1
Species:mouse
Chr:chr12
Start:49436643
End:49436677
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1295821,EM10E0535918)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK014151:0
AK019435:0
GeneID:67293
HGNC/MGI_ID:MGI:1914543
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000127041.3:-208
  • NR_026733.1:-208
view more...
Gene_name:RIKEN cDNA 3110039M20 gene
Gene_symbol:3110039M20Rik
Gene_synonyms:
Gene_source:MGI:1914543



TATA-Box annotation


Distance to TSS:225
Nearest PromoterID:NR_026733.1
Entrez ID:3110039M20Rik
Nearest Unigene:NR_026733
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 3110039M20 gene
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.