rfmm_117790.1

Basic information about the TSS

---

TSS ID: rfmm_117790.1 TSS ID(Version3): mm_108267.1 mm_108266.1 mm_108268.1 Species: mouse Chr: chr12		Start: 78795640 End: 78795793 Strand: +
Source datasets	FANTOM5|EPD|PRJDB10397|GSE117655|DRA000914
Protocol	CAGE|TSS_database|C1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

---

Description:	PLS (EM10D2410185,EM10E0995210)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENSMUST00000219197.2:0 ENSMUST00000219667.2:0 ENSMUST00000082024.7:0 AK133187:0 BC067404:0 AK032731:0 AK162014:0 BC075698:0 GeneID: 56217 HGNC/MGI_ID: MGI:1927339 UniProt_ID: A0A1W2P6P0 A0A1W2P7Z6 B2RRY4 Nearer transcript ids and distances: AK014444:1 AF199008:2 BC138624:49 view more...

Gene_name: protein associated with LIN7 1, MAGUK family member Gene_symbol: Pals1 Gene_synonyms: 3830420B02Rik Mpp5 Pals1 Gene_source: MGI:1927339

TATA-Box annotation

---

Distance to TSS:	-5
Nearest PromoterID:	NM_019579.3
Entrez ID:	Mpp5
Nearest Unigene:	XM_006516098
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protein associated with LIN7 1, MAGUK family member
Gene Alias:
Gene Type:
CpG%:	0.117647
GC%:	0.681818
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.