rfmm_117791.1

Basic information about the TSS

TSS ID:	rfmm_117791.1
Species:	mouse
Chr:	chr12

Start:	78795802
End:	78795815
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	AF199008:-7
GeneID:	56217
HGNC/MGI_ID:	MGI:1927339
UniProt_ID:	Q9JLB2
Nearer transcript ids and distances:	AK014444:-8 BC138624:27 ENSMUST00000082024.7:-36 BC075698:-36 AK032731:-38 AK162014:-38 NM_019579.3:-81 ENSMUST00000219667.2:-102 BC067404:-104 AK133187:-117 ENSMUST00000219197.2:-121 view more...

Gene_name:	protein associated with LIN7 1, MAGUK family member
Gene_symbol:	Pals1
Gene_synonyms:	3830420B02Rik Mpp5 Pals1
Gene_source:	MGI:1927339

TATA-Box annotation

Distance to TSS:	87
Nearest PromoterID:	NM_019579.3
Entrez ID:	Mpp5
Nearest Unigene:	XM_006516098
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protein associated with LIN7 1, MAGUK family member
Gene Alias:
Gene Type:
CpG%:	0.076923
GC%:	0.785714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.