rfmm_11864.1

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Basic information about the TSS


TSS ID:rfmm_11864.1
Species:mouse
Chr:chr2
Start:16462148
End:16462158
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK143431:307
GeneID:100504058
HGNC/MGI_ID:MGI:5012223
UniProt_ID:Q3UPM0
Nearer transcript ids and distances:
    Gene_name:predicted gene, 20038
    Gene_symbol:Gm20038
    Gene_synonyms:
    Gene_source:MGI:5012223



    TATA-Box annotation


    Distance to TSS:101038
    Nearest PromoterID:NM_026162.6
    Entrez ID:Plxdc2
    Nearest Unigene:XM_006497531
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 20038
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.454545
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.