rfmm_119032.1

Basic information about the TSS

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TSS ID: rfmm_119032.1 TSS ID(Version3): mm_108894.1 Species: mouse Chr: chr12		Start: 100076408 End: 100076460 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D1320503,EM10E0545623)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000222374.2:0 ENSMUST00000021595.10:0 AK161641:0 AK161723:0 AK133926:0 AK088411:0 AK148906:0 BC003860:0 AK166783:0 AK169015:0 GeneID: 19179 HGNC/MGI_ID: MGI:106054 UniProt_ID: Q542I9 Nearer transcript ids and distances: NM_008947.3:1 ENSMUST00000223078.2:14 view more...

Gene_name: protease (prosome, macropain) 26S subunit, ATPase 1 Gene_symbol: Psmc1 Gene_synonyms: P26s4 Rpt2/S4 S4 rpt2 Gene_source: MGI:106054

TATA-Box annotation

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Distance to TSS:	-27
Nearest PromoterID:	NM_008947.3
Entrez ID:	Psmc1
Nearest Unigene:	NM_008947
Nearest Refseq:
Nearest Ensembl:
Gene Name:	protease (prosome, macropain) 26S subunit, ATPase 1
Gene Alias:
Gene Type:
CpG%:	0.096154
GC%:	0.622642
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.