rfmm_119327.1

Basic information about the TSS

TSS ID:	rfmm_119327.1
TSS ID(Version3):	mm_109016.1
Species:	mouse
Chr:	chr12

Start:	103400474
End:	103400584
Strand:	+

Source datasets

FANTOM5|EPD|DRA000914|GSE117655

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D1322700,EM10E0546727)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000122905.8:0 ENSMUST00000085065.12:0 ENSMUST00000148824.2:0 ENSMUST00000140838.2:0 AK003665:0 AK075797:0 BC125301:0 BC125636:0 AK169926:0 BC128276:0 AK187394:0
GeneID:	52668
HGNC/MGI_ID:	MGI:1277180 MGI:1924183
UniProt_ID:	D3Z4L8 Q8C6G0
Nearer transcript ids and distances:	ENSMUST00000066701.13:-3 AK146231:-3 ENSMUST00000079294.12:-4 ENSMUST00000076788.12:-4 ENSMUST00000076702.12:-4 AJ566111:-4 AJ566112:-4 AJ566113:-4 AJ566114:-4 AJ566115:-4 NM_194069.2:-26 NM_194068.2:-26 NM_194067.2:-26 NM_001364174.1:-26 NM_194066.2:-26 NM_026790.2:-26 NM_001364173.1:-26 LF199296:-41 MA434873:-41 LF199295:-343 MA434872:-343 view more...

Gene_name:	interferon, alpha-inducible protein 27; interferon, alpha-inducible protein 27 like 2A
Gene_symbol:	Ifi27 Ifi27l2a
Gene_synonyms:	1110013J02Rik 2310061N23Rik 2900026P10Rik D12Ertd647e Ifi27 Ifi27l1
Gene_source:	MGI:1277180 MGI:1924183

TATA-Box annotation

Distance to TSS:	81
Nearest PromoterID:	NM_001364173.1
Entrez ID:	Ifi27
Nearest Unigene:	NM_194066
Nearest Refseq:
Nearest Ensembl:
Gene Name:	interferon, alpha-inducible protein 27; interferon, alpha-inducible protein 27 like 2A
Gene Alias:
Gene Type:
CpG%:	0.018182
GC%:	0.504505
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENSMUST00000066701.13:-3 AK146231:-3 ENSMUST00000079294.12:-4 ENSMUST00000076788.12:-4 ENSMUST00000076702.12:-4 AJ566111:-4 AJ566112:-4 AJ566113:-4 AJ566114:-4 AJ566115:-4 NM_194069.2:-26 NM_194068.2:-26 NM_194067.2:-26 NM_001364174.1:-26 NM_194066.2:-26 NM_026790.2:-26 NM_001364173.1:-26 LF199296:-41 MA434873:-41 LF199295:-343 MA434872:-343" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.