rfmm_120078.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_120078.1
Species:mouse
Chr:chr12
Start:110452614
End:110452624
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2421232,EM10E0999968)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_168659.1:0
NR_168660.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000221514.2:-14
  • ENSMUST00000222803.2:-18
  • AK179274:228
  • KY467656:452
  • KY467657:452
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NR_168660.1
Entrez ID:Gm19605
Nearest Unigene:NR_168659
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.272727
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):