rfmm_120087.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_120087.1
Species:mouse
Chr:chr12
Start:110558021
End:110558042
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2421307,EM10E1000009)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK020436:7
GeneID:77271
HGNC/MGI_ID:MGI:1924521
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RIKEN cDNA 9430024F10 gene
    Gene_symbol:9430024F10Rik
    Gene_synonyms:
    Gene_source:MGI:1924521



    TATA-Box annotation


    Distance to TSS:223
    Nearest PromoterID:NR_033340.1
    Entrez ID:B930059L03Rik
    Nearest Unigene:NR_033340
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:RIKEN cDNA 9430024F10 gene
    Gene Alias:
    Gene Type:
    CpG%:0.095238
    GC%:0.636364
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.