rfmm_120088.1

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Basic information about the TSS


TSS ID:rfmm_120088.1
Species:mouse
Chr:chr12
Start:110558168
End:110558225
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2421307,EM10E1000009)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK083693:0
GeneID:319786
HGNC/MGI_ID:MGI:2442724
UniProt_ID:
Nearer transcript ids and distances:
  • NR_033340.1:-360
  • AK047421:-360
view more...
Gene_name:RIKEN cDNA B930059L03 gene
Gene_symbol:B930059L03Rik
Gene_synonyms:
Gene_source:MGI:2442724



TATA-Box annotation


Distance to TSS:388
Nearest PromoterID:NR_033340.1
Entrez ID:B930059L03Rik
Nearest Unigene:NR_033340
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA B930059L03 gene
Gene Alias:
Gene Type:
CpG%:0.087719
GC%:0.637931
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.