rfmm_120264.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_120264.1
TSS ID(Version3):mm_109539.1
Species:mouse
Chr:chr12
Start:111540921
End:111540976
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2421902,EM10E1000321)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000075281.8:0
ENSMUST00000084953.13:0
ENSMUST00000222080.2:0
AK083683:0
AK166157:0
AK132247:0
BC066071:0
GeneID:17169
HGNC/MGI_ID:MGI:1341865
UniProt_ID:Q03141
Nearer transcript ids and distances:
  • AK049500:-10
  • AF240782:429
  • AF240783:429
  • ENSMUST00000221448.2:472
view more...
Gene_name:MAP/microtubule affinity regulating kinase 3
Gene_symbol:Mark3
Gene_synonyms:1600015G02Rik A430080F22Rik C-TAK1 ETK-1
Gene_source:MGI:1341865



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_022801.4
Entrez ID:Mark3
Nearest Unigene:XM_006515512
Nearest Refseq:
Nearest Ensembl:
Gene Name:MAP/microtubule affinity regulating kinase 3
Gene Alias:
Gene Type:
CpG%:0.072727
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.