rfmm_120530.1

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Basic information about the TSS


TSS ID:rfmm_120530.1
Species:mouse
Chr:chr12
Start:113104287
End:113104290
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2422944,EM10E1000901)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001347443.1:-62
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000200380.5:-95
  • CT010309:-95
  • BC002096:-106
  • BC007149:-106
  • AK002484:-116
  • BC002093:-120
  • AF469648:-136
  • ENSMUST00000084882.9:-431
  • NM_024223.2:-431
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:63
Nearest PromoterID:NM_001347443.1
Entrez ID:Crip2
Nearest Unigene:NM_001347443
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):