rfmm_121960.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_121960.1
Species:mouse
Chr:chr13
Start:21547342
End:21547342
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2428400,EM10E1002629)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000099720.3:113
U62908:113
GeneID:22758
HGNC/MGI_ID:MGI:1099444
UniProt_ID:Q9Z1D7
Nearer transcript ids and distances:
  • LF235944:-157
  • MA471521:-157
  • LF199420:-275
  • MA434997:-275
  • BC027041:-310
  • AK142005:-330
  • ENSMUST00000053293.14:-340
  • AK139837:-340
  • AK075886:-345
  • ENSMUST00000225545.2:-352
  • NM_016684.2:-352
  • AK129138:-352
view more...
Gene_name:zinc finger and SCAN domain containing 12
Gene_symbol:Zscan12
Gene_synonyms:Zfp96
Gene_source:MGI:1099444



TATA-Box annotation


Distance to TSS:292
Nearest PromoterID:XM_006516660.3
Entrez ID:Zscan12
Nearest Unigene:XM_006516660
Nearest Refseq:
Nearest Ensembl:
Gene Name:zinc finger and SCAN domain containing 12
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.