rfmm_122105.1

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Basic information about the TSS


TSS ID:rfmm_122105.1
TSS ID(Version3):mm_115931.1
Species:mouse
Chr:chr13
Start:23758362
End:23758442
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D1340771,EM10E0553760)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000105106.2:0
GeneID:319180
HGNC/MGI_ID:MGI:2448383
UniProt_ID:P10853
Nearer transcript ids and distances:
    Gene_name:H2B clustered histone 7
    Gene_symbol:H2bc7
    Gene_synonyms:Hist1h2bf
    Gene_source:MGI:2448383



    TATA-Box annotation


    Distance to TSS:-21
    Nearest PromoterID:NM_178195.3
    Entrez ID:H2bc7
    Nearest Unigene:NM_178195
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:H2B clustered histone 7
    Gene Alias:
    Gene Type:
    CpG%:0.012500
    GC%:0.432099
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.