rfmm_122158.1

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Basic information about the TSS


TSS ID:rfmm_122158.1
Species:mouse
Chr:chr13
Start:23941587
End:23941612
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000139822.3:0
AK016178:0
GeneID:218102
HGNC/MGI_ID:MGI:3590517
UniProt_ID:
Nearer transcript ids and distances:
  • AK133404:5
Gene_name:RIKEN cDNA 4930558J22 gene
Gene_symbol:4930558J22Rik
Gene_synonyms:
Gene_source:MGI:3590517



TATA-Box annotation


Distance to TSS:679
Nearest PromoterID:NM_178193.2
Entrez ID:H4c2
Nearest Unigene:NM_178193
Nearest Refseq:
Nearest Ensembl:
Gene Name:RIKEN cDNA 4930558J22 gene
Gene Alias:
Gene Type:
CpG%:0.040000
GC%:0.423077
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.