rfmm_1222.1

Basic information about the TSS

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TSS ID: rfmm_1222.1 Species: mouse Chr: chr1		Start: 39232821 End: 39232879 Strand: +
Source datasets	FANTOM5
Protocol	CAGE
TSS cluster detected*	1

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	pELS (EM10D2268957,EM10E0934518)
Category:	pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000173050.8:-9 GeneID: 18143 HGNC/MGI_ID: MGI:109232 UniProt_ID: G3UYV8 Nearer transcript ids and distances: ENSMUST00000056815.9:414 U77969:414 NM_008719.2:474 BC109166:474 view more...

Gene_name: neuronal PAS domain protein 2 Gene_symbol: Npas2 Gene_synonyms: MOP4 bHLHe9 Gene_source: MGI:109232

TATA-Box annotation

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Distance to TSS:	-163
Nearest PromoterID:	XM_011238452.4
Entrez ID:	Npas2
Nearest Unigene:	NM_008719
Nearest Refseq:
Nearest Ensembl:
Gene Name:	neuronal PAS domain protein 2
Gene Alias:
Gene Type:
CpG%:	0.137931
GC%:	0.762712
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.