rfmm_123046.1

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Basic information about the TSS


TSS ID:rfmm_123046.1
Species:mouse
Chr:chr13
Start:38010594
End:38010682
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2433329,EM10E1004680)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001177868.1:206
NR_033615.1:206
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000149745.8:226
  • ENSMUST00000124373.8:226
  • AK171375:226
  • AK047047:226
  • AK047251:226
  • ENSMUST00000128570.9:-303
  • BC080680:-426
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-77
Nearest PromoterID:XM_036158149.1
Entrez ID:Rreb1
Nearest Unigene:XM_006516756
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.102273
GC%:0.741573
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):