rfmm_123111.1

Basic information about the TSS

TSS ID:	rfmm_123111.1
TSS ID(Version3):	mm_169088.1 mm_113564.1
Species:	mouse
Chr:	chr13

Start:	38388874
End:	38389095
Strand:	+

Source datasets

DRA000914|GSE117655|PRJDB10397

Protocol

CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

3

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2433534,EM10E1004796)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000223557.2:0 ENSMUST00000223814.2:0 ENSMUST00000091641.13:0 ENSMUST00000178564.2:0 ENSMUST00000223680.2:0 AK036713:0 AK087789:0 AK012916:0 AK018315:0 AK172155:0 AK007431:0 BC037073:0 BC021443:0
GeneID:	67797
HGNC/MGI_ID:	MGI:1915047
UniProt_ID:	J3QMA8 Q9D361
Nearer transcript ids and distances:

Gene_name:	small nuclear ribonucleoprotein 48 (U11/U12)
Gene_symbol:	Snrnp48
Gene_synonyms:	1110050F08Rik 6530403A03Rik
Gene_source:	MGI:1915047

TATA-Box annotation

Distance to TSS:	69
Nearest PromoterID:	NM_026382.2
Entrez ID:	Snrnp48
Nearest Unigene:	NM_026382
Nearest Refseq:
Nearest Ensembl:
Gene Name:	small nuclear ribonucleoprotein 48 (U11/U12)
Gene Alias:
Gene Type:
CpG%:	0.085973
GC%:	0.675676
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.