rfmm_123442.1

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Basic information about the TSS


TSS ID:rfmm_123442.1
Species:mouse
Chr:chr13
Start:44172049
End:44172080
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS (EM10D2435597,EM10E1005563)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000223171.2:51
AK146979:51
GeneID:102636424
HGNC/MGI_ID:MGI:5592648
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:predicted gene, 33489
    Gene_symbol:Gm33489
    Gene_synonyms:
    Gene_source:MGI:5592648



    TATA-Box annotation


    Distance to TSS:4182
    Nearest PromoterID:XR_382280.4
    Entrez ID:Gm33489
    Nearest Unigene:XR_004938176
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:predicted gene, 33489
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.375000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.