rfmm_123719.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfmm_123719.1
Species:mouse
Chr:chr13
Start:48816362
End:48816364
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2437586,EM10E1006400)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF203156:-93
MA438733:-93
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000021813.5:110
  • NM_007526.4:148
  • AJ297677:149
  • Y07960:407
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-95
Nearest PromoterID:XR_382334.4
Entrez ID:Gm36606
Nearest Unigene:XR_004938116
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):