rfmm_123920.1

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Basic information about the TSS


TSS ID:rfmm_123920.1
Species:mouse
Chr:chr13
Start:51255379
End:51255379
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:pELS,CTCF-bound (EM10D2438295,EM10E1006719)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001283029.1:204
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK088127:205
  • AK134259:-424
  • BC016517:-438
  • ENSMUST00000095797.6:-463
  • NM_001283030.1:-463
  • NM_146043.4:-463
  • NM_001283028.1:-463
  • AK168544:-463
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:198
Nearest PromoterID:XM_006516893.5
Entrez ID:Spin1
Nearest Unigene:NM_011462
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):