rfmm_12396.1

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Basic information about the TSS


TSS ID:rfmm_12396.1
TSS ID(Version3):mm_17130.1
Species:mouse
Chr:chr2
Start:24809584
End:24809628
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB10397|GSE117655
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan|C1CAGE|deepCAGE
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2628101,EM10E1083939)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000147147.8:0
ENSMUST00000046227.12:0
ENSMUST00000114432.9:0
ENSMUST00000102938.10:0
ENSMUST00000091348.11:0
ENSMUST00000200655.5:0
ENSMUST00000139000.4:0
ENSMUST00000152161.8:0
ENSMUST00000150379.2:0
AK082062:0
AK052174:0
AB205007:0
AK054555:0
AK084994:0
AK043898:0
GeneID:77683
HGNC/MGI_ID:MGI:1924933
UniProt_ID:A0A0G2JEQ4 A0A0H2UH19 A0A1B0GXE2 A2AIS5 Q5DW34 Q8BRN2 Q8C3T0 Z4YJZ7
Nearer transcript ids and distances:
    Gene_name:euchromatic histone methyltransferase 1
    Gene_symbol:Ehmt1
    Gene_synonyms:9230102N17Rik KMT1D
    Gene_source:MGI:1924933



    TATA-Box annotation


    Distance to TSS:15
    Nearest PromoterID:NM_001012518.3
    Entrez ID:Ehmt1
    Nearest Unigene:XM_017319336
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:euchromatic histone methyltransferase 1
    Gene Alias:
    Gene Type:
    CpG%:0.159091
    GC%:0.844444
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.