rfmm_124095.1

Basic information about the TSS

TSS ID:	rfmm_124095.1
TSS ID(Version3):	mm_116789.1
Species:	mouse
Chr:	chr13

Start:	53531353
End:	53531409
Strand:	-

Source datasets

FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397

Protocol

CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE

TSS cluster detected^*

5

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	PLS (EM10D2439421,EM10E1007274)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENSMUST00000221265.2:0 ENSMUST00000221709.2:0 AK089030:0 X95641:0 BC046323:0 AK084391:0 AK079578:0 AK028713:0 AK084445:0 AK053207:0 AF003823:0
GeneID:	268656
HGNC/MGI_ID:	MGI:1099431
UniProt_ID:	Q3V3Z5 Q8C295
Nearer transcript ids and distances:	ENSMUST00000021920.8:-24 AK161140:-24 LF199536:-45 MA435113:-45 LF236553:215 MA472130:215 view more...

Gene_name:	serine palmitoyltransferase, long chain base subunit 1
Gene_symbol:	Sptlc1
Gene_synonyms:	Lcb1 Spt1
Gene_source:	MGI:1099431

TATA-Box annotation

Distance to TSS:	16
Nearest PromoterID:	NM_009269.2
Entrez ID:	Sptlc1
Nearest Unigene:	NM_009269
Nearest Refseq:
Nearest Ensembl:
Gene Name:	serine palmitoyltransferase, long chain base subunit 1
Gene Alias:
Gene Type:
CpG%:	0.071429
GC%:	0.684211
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.